- Paul Friedman Research Projects
- Datasets
Datasets in Space Paul Friedman Research Projects
The Space team has made the following datasets publicly available.
Supp Files and Code for Paul Friedman et al., "Reproducibility of organ-level effects in repeat dose animal studies"
Supplemental File 1 contains the datasets used in MLR for estimation of variance.
Supplemental File 2 contains tabular reporting of input data for concordance analysis and results as percent concordance observed by chemical-endpoint, chemical-endpoint-species, and chemical-endpoint-study type combinations.
Supplemental File 3 contains MLR study descriptors and results for quantitative estimates of variance.
Supplemental File 4 contains odds ratio datasets and results.
Supplemental File 5 contains summarized LEL and HED values, ToxCast assay endpoint information, and calculated AED50 values using library(httk) v2.2.2.
Supplemental File 6 contains the R code used for this analysis and figures in this work, available as a knitted R Markdown file (exported as html). The code (performed with R version 4.2.1).
Supplemental File 7 contains Supplemental Figures 1, 2, and 3.
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tcpl v3 and invitrodb v4.0
Supplemental files to accompany Feshuk et al., "The ToxCast Pipeline: Updates to Curve-fitting Approaches and Database Structure", DOI https://doi.org/10.3389/ftox.2023.1275980, PMC10552852
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HTH295R Modeling Materials
PDF papers, two spreadsheets with modeling outputs, presentation
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Supp Files for Foster et al. HTH295R SAR
The supplemental files that accompany Foster et al., "Evaluating structure-based activity in a high-throughput assay for steroid biosynthesis."
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Supplemental File 2 contains tabular reporting of input data for concordance analysis and results as percent concordance observed by chemical-endpoint, chemical-endpoint-species, and chemical-endpoint-study type combinations.
Supplemental File 3 contains MLR study descriptors and results for quantitative estimates of variance.
Supplemental File 4 contains odds ratio datasets and results.
Supplemental File 5 contains summarized LEL and HED values, ToxCast assay endpoint information, and calculated AED50 values using library(httk) v2.2.2.
Supplemental File 6 contains the R code used for this analysis and figures in this work, available as a knitted R Markdown file (exported as html). The code (performed with R version 4.2.1).
Supplemental File 7 contains Supplemental Figures 1, 2, and 3.